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Protein Overview: gi|30264362, gi|...

General Information:
Name(s) found: gi|30264362 [NCBI NR]
gi|30259020 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30264362|ref|NP_846739.1| RNA polymerase sigma factor RpoD [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259020|gb|AAP28225.1| RNA polymerase sigma-43 factor [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 373 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription initiation [ISSLink to PubMed article]
    Molecular Function: sigma factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKPARSKQ IETEMTLEQV KEQLTELGKK RGVLTYEEIA ERMNGFEIES DQMDEYYEYL  60
   61 GEQGIDLVGD NDEGPNNHQI TKTEEEFDLN DLSVPPGVKI NDPVRMYLKE IGRVDLLSAE 120
  121 EEIRLATRIE EGDEEAKRRL AEANLRLVVS IAKRYVGRGM LFLDLIQEGN MGLIKAVEKF 180
  181 DYRKGFKFST YATWWIRQAI TRAIADQART IRIPVHMVET INKLIRVQRQ LLQDLGREPS 240
  241 PEEIGEEMDL APEKVREILK IAQEPVSLET PIGEEDDSHL GDFIEDQEAT SPADHAAYEL 300
  301 LKEQLEDVLD TLTDREENVL RLRFGLDDGR TRTLEEVGKV FGVTRERIRQ IEAKALRKLR 360
  361 HPSRSKRLKD FLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..373] PSI-BLAST 58.522879 DNA-directed RNA polymerase alpha(2), beta, beta-prime and omega subunits


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle