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Protein Overview: gi|30265348, gi|...

General Information:
Name(s) found: gi|30265348 [NCBI NR]
gi|30260026 [NCBI NR]
Description(s) found:
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  • gi|30265348|ref|NP_847725.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30260026|gb|AAP29211.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Ames] [NCBI NR]
  • sua5/yciO/yrdC/ywlC family protein [Bacillus cereus ZK]gi|51973706|gb|AAU15256.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus ZK]gi|49480413|ref|YP_039318.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar konkukian str. 97-27 [nrdb_11152004_Chlamydomonas]
  • sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 346 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTNMWVVDN VVERKKYYPQ LQEAAKLLRE NEAIAFPTET VYGLGANAMN DEAIAKIFEA  60
   61 KGRPSDNPLI VHIGTKSQLD GIVKEIPPVA EKLMEHFWPG PLTIILPRKE GISEKVTAGL 120
  121 HTVGVRMPDH PVALALIEEA NVPVAAPSAN RSGRPSPTLA SHVYEDLNEK IAGIVDGGAT 180
  181 GVGVESTVID CTSAVPTILR PGGITKEQLE AVIGTVSLDP ALKDEKEKPK SPGMKYTHYA 240
  241 PKAPLSIVEG SREFIQRLVD EKKEEGFKVG VLTTEEYHHI YNADVVLSCG VRSDLASVAT 300
  301 KLYDVLRTFD ASEVDVIFSE SFPNEGIGNA IMNRLTKAAG HHIITE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 57.522879 Hypothetical protein YciO
    2 View Details [215..346] PSI-BLAST 22.0 No description for 2yv4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • telomeric DNA binding
    		•  2.58217232196133 bayes_pls_golite062009
  • single-stranded telomeric DNA binding
    		•  1.94245361512193 bayes_pls_golite062009
  • binding
    		•  1.44524229223398 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.15094304608167 bayes_pls_golite062009
  • DNA binding
    		•  0.99027678526068 bayes_pls_golite062009
  • RNA binding
    		•  0.63108051002538 bayes_pls_golite062009
  • catalytic activity
    		•  0.343636936190038 bayes_pls_golite062009
  • protein binding
    		•  0.207821310455625 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.0989469098854212 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle