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Protein Overview: gi|25302280

General Information:
Name(s) found: gi|25302280 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||H97607 hypothetical protein AGR_C_3739 [imported] - Agrobacterium tumefaciens (strain C58, Cereon) [NCBI NR]
    • Organism: Agrobacterium tumefaciens
    Length: 225 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQSRLGIL RKKGRHIMKA LLLIDIQNGF CPGGNLAVTD GDAVVPIANA LIDNGGYDLI  60
   61 VASQDWHPEN HGSFASQHPG KQPFDMGELS GKPQMMWPDH CVQGTPDAEF HPDLNMEAFD 120
  121 YIQQKGENPA IDSYSAFRDN DQVATTGLSD YLARQGVTQL DVCGLATDYC VSFSVQDALD 180
  181 MLPGVKVRFI EDASRGIDPQ GIKAAVAAMR EKGAVILKSR DILRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 44.39794 Pyrazinamidase/nicotinamidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinamidase activity
    		•  2.590271821288 bayes_pls_golite062009
  • binding
    		•  1.80707112356899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.33901087189475 bayes_pls_golite062009
  • catalytic activity
    		•  0.992051062697807 bayes_pls_golite062009
  • protein binding
    		•  0.343971697425971 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle