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Protein Overview: gi|54310321, gi|...

General Information:
Name(s) found: gi|54310321 [NCBI NR]
gi|46914762 [NCBI NR]
Description(s) found:
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  • gi|54310321|ref|YP_131341.1| putative ubiquinol--cytochrome c reductase, cytochrome c1 [Photobacterium profundum SS9] [NCBI NR]
  • gi|46914762|emb|CAG21539.1| putative ubiquinol--cytochrome c reductase, cytochrome c1 [Photobacterium profundum SS9] [NCBI NR]
  • putative ubiquinol--cytochrome c reductase, cytochrome c1 [Photobacterium profundum SS9]gi|46914762|emb|CAG21539.1| putative ubiquinol--cytochrome c reductase, cytochrome c1 [Photobacterium profundum] [nrdb_11152004_Chlamydomonas]
  • putative ubiquinol--cytochrome c reductase, cytochrome c1 [Photobacterium profundum SS9] [nr-271106-contam.fasta]
    • Organism: Photobacterium profundum SS9
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLIVMLLA LLPSVVMAAG GNVHLDAANN DLSDKASLQR GAKTFVNYCF GCHATQYQRY  60
   61 ERVATDLDIP LDLMRDNLIF DKNAKVGDLM TNSISKEYAA VSFGAPAPDL TLVARVRGTD 120
  121 WLYTYLRSFY ADPSRPFGVN NVIFPSVGMP HVLEELQGVP TKVYETRLVD GEEVQEYVGI 180
  181 KSNGAGELNA DEYDEVVRDL VNFLEYSAEP MKLERQRLGL WVMGFIVIFF VLTVLLKKEY 240
  241 WRDVH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 68.522879 Cytochrome bc1 domain; Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquinol-cytochrome-c reductase activity
    		•  3.4564166385356 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  3.4564166385356 bayes_pls_golite062009
  • electron carrier activity
    		•  3.40214573753335 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors
    		•  3.08381068515965 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.491960995681 bayes_pls_golite062009
  • electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity
    		•  1.41573374177098 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle