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Protein Overview: gi|54310188, gi|...

General Information:
Name(s) found: gi|54310188 [NCBI NR]
gi|46914629 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|54310188|ref|YP_131208.1| putative signal peptidase I [Photobacterium profundum SS9] [NCBI NR]
  • gi|46914629|emb|CAG21406.1| putative signal peptidase I [Photobacterium profundum SS9] [NCBI NR]
    • Organism: Photobacterium profundum SS9
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV LATLFTGLIW ALDRFVWAPK RQLKIDAAAS NAGDQVDVKT LETVAPQPSW  60
   61 IESTSSMFPV IALIMVFRSF VYEPFQIPSG SMMPTLLIGD FILVEKFAYG LRDPVFRHKL 120
  121 IETSEPERGD VVVFKYPPQP NIDYIKRVVG MPGDTVRYSA DKQICIAPKG TADCTFVPLT 180
  181 NMADSEFTQN MTRLVQFNEK LGDADHQILV NPLKRDRTLA YQPRPGITEW VVPEGHYFMM 240
  241 GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFERSADS ALPSWIPTDV RFNRIGSIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 57.0 Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  0.485843348899278 bayes_pls_golite062009
  • catalytic activity
    		•  0.415601732277814 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.237734983138449 bayes_pls_golite062009
  • hydrolase activity
    		•  0.188292586303013 bayes_pls_golite062009
  • protein binding
    		•  0.0579980138351139 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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