YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54310188, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV LATLFTGLIW ALDRFVWAPK RQLKIDAAAS NAGDQVDVKT LETVAPQPSW  60
   61 IESTSSMFPV IALIMVFRSF VYEPFQIPSG SMMPTLLIGD FILVEKFAYG LRDPVFRHKL 120
  121 IETSEPERGD VVVFKYPPQP NIDYIKRVVG MPGDTVRYSA DKQICIAPKG TADCTFVPLT 180
  181 NMADSEFTQN MTRLVQFNEK LGDADHQILV NPLKRDRTLA YQPRPGITEW VVPEGHYFMM 240
  241 GDNRDNSADS RYWGFVPEAN LVGKAVAIWI SFEFERSADS ALPSWIPTDV RFNRIGSIN

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	299	0.94