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Protein Overview: gi|46913486, gi|...

General Information:
Name(s) found: gi|54309054 [NCBI NR]
gi|46913486 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|54309054|ref|YP_130074.1| putative formate dehydrogenase accessory protein [Photobacterium profundum SS9] [NCBI NR]
  • gi|46913486|emb|CAG20272.1| Putative formate dehydrogenase accessory protein [Photobacterium profundum SS9] [NCBI NR]
    • Organism: Photobacterium profundum SS9
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLPKIIKT NSSVSQTMTV DVMDEYGDMM TKEIACEHPL TVYLNWIEVV TLMTLGERPS  60
   61 ALVLGYLKNQ GFIDDIEAIE SVIIDWDTNS AAVITKENTD GLEKKLGKKT VTSGCGQGTM 120
  121 FGNVMKKLEG VTLPQPTLTQ STLYGLLESL THHNETYKAA GAVHGCAVCK DTSILSFVED 180
  181 VGRHNAVDTL AGEMWLKGET GEDKIFYTTG RLTSEMVIKV AQMGIPVLLS RSGATQMGYD 240
  241 LAKTLGITMI ARAKGNRFQV YNGMDNLILD VKGDASGFNL DDKAKGAHRG DRSGGKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 54.39794 No description for 2pw9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  11.6538357294979 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  6.39976727113281 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.99996975993203 bayes_pls_golite062009
  • oxidoreductase activity
    		•  5.01622492889917 bayes_pls_golite062009
  • catalytic activity
    		•  1.70756445127105 bayes_pls_golite062009
  • electron carrier activity
    		•  0.851003321957332 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.113989053833271 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle