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View Structure Prediction Details

Protein: gi|46913486, gi|...
Organism: Photobacterium profundum SS9
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46913486, gi|....

Description E-value Query
Range
Subject
Range
gi|90325159, gi|... - gi|90413848|ref|ZP_01221835.1| Putative formate dehydrogenase accessory protein [Photobacterium prof...
365.0 [0..1] [297..1]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQLPKIIKT NSSVSQTMTV DVMDEYGDMM TKEIACEHPL TVYLNWIEVV TLMTLGERPS  60
   61 ALVLGYLKNQ GFIDDIEAIE SVIIDWDTNS AAVITKENTD GLEKKLGKKT VTSGCGQGTM 120
  121 FGNVMKKLEG VTLPQPTLTQ STLYGLLESL THHNETYKAA GAVHGCAVCK DTSILSFVED 180
  181 VGRHNAVDTL AGEMWLKGET GEDKIFYTTG RLTSEMVIKV AQMGIPVLLS RSGATQMGYD 240
  241 LAKTLGITMI ARAKGNRFQV YNGMDNLILD VKGDASGFNL DDKAKGAHRG DRSGGKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.39794
Match: 2pw9A
Description: No description for 2pw9A was found.

Predicted functions:

Term Confidence Notes
formate dehydrogenase activity 11.6538357294979 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 6.39976727113281 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 5.99996975993203 bayes_pls_golite062009
oxidoreductase activity 5.01622492889917 bayes_pls_golite062009
catalytic activity 1.70756445127105 bayes_pls_golite062009
electron carrier activity 0.851003321957332 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.113989053833271 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle