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Protein Overview: gi|54308469, gi|...

General Information:
Name(s) found: gi|54308469 [NCBI NR]
gi|46912898 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|54308469|ref|YP_129489.1| keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [Photobacterium profundum SS9] [NCBI NR]
  • gi|46912898|emb|CAG19687.1| putative 2-keto-3-deoxy-6-phosphogluconatealdolase [Photobacterium profundum SS9] [NCBI NR]
    • Organism: Photobacterium profundum SS9
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQLIEKLK AFKVIPVIQI NNIEQAVPLA KTLVENGLPV AEVTFRTEAA AEAIRLMREA  60
   61 YPEMCIGAGT VLNAEQVDRA VEAGAEFVVA PGLNPNTVRY CQEINIPMVP GVNNPSQVEQ 120
  121 ALELGLTFLK FFPAEASGGI NMVKSLLAPY VDVSFMPTGG IGEANIRDYL AVDRILCCGG 180
  181 TWMVSPKMIE AGQWDEIGKL VREAVALVQD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 45.0 Crystal structure of a putative KHG/KDPG aldolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2-dehydro-3-deoxy-phosphogluconate aldolase activity
    		•  3.5031381823147 bayes_pls_golite062009
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  0.840107349031025 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.643395146148785 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009
  • transaldolase activity
    		•  0.337067552042715 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle