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Protein Overview: gi|52307579, gi|...

General Information:
Name(s) found: gi|52425527 [NCBI NR]
gi|52307579 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|52425527|ref|YP_088664.1| orotidine 5'-phosphate decarboxylase [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
  • gi|52307579|gb|AAU38079.1| PyrF protein [Mannheimia succiniciproducens MBEL55E] [NCBI NR]
    • Organism: Mannheimia succiniciproducens MBEL55E
    Length: 245 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAKFSKEEV NMSNKIIVAL DYETEKEALQ LVDQIDPSLC RLKVGKEMFT TLGTNFVKLL  60
   61 QDRDFDVFLD LKFHDIPNTV ARAVRSAADL GVWMVDLHAS GGLRMMEEAK KILEPYGKDA 120
  121 PILISVTVLT SMEDLDLLQI GINASPMEQV IRLAHLSQRA GLDGVVCSPQ EVEILRQHLG 180
  181 KEFKLITPGI RPVGSEFGDQ RRVMTPPAAI EAGSDYLVIG RPITQAANPA EVLRSINASI 240
  241 ANLIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 57.30103 Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • orotidine-5'-phosphate decarboxylase activity
    		•  2.87717797280068 bayes_pls_golite062009
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • ribulose-phosphate 3-epimerase activity
    		•  0.982517927791965 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.83446736141993 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.108467338662618 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle