YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ISPH_ARATH

General Information:
Name(s) found: ISPH_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=ISPH PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: response to antibiotic [ISS]
    isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway [IEP][IGI][ISS]
    Molecular Function: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [IGI]
    4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVALQFSRL CVRPDTFVRE NHLSGSGSLR RRKALSVRCS SGDENAPSPS VVMDSDFDAK  60
   61 VFRKNLTRSD NYNRKGFGHK EETLKLMNRE YTSDILETLK TNGYTYSWGD VTVKLAKAYG 120
  121 FCWGVERAVQ IAYEARKQFP EERLWITNEI IHNPTVNKRL EDMDVKIIPV EDSKKQFDVV 180
  181 EKDDVVILPA FGAGVDEMYV LNDKKVQIVD TTCPWVTKVW NTVEKHKKGE YTSVIHGKYN 240
  241 HEETIATASF AGKYIIVKNM KEANYVCDYI LGGQYDGSSS TKEEFMEKFK YAISKGFDPD 300
  301 NDLVKVGIAN QTTMLKGETE EIGRLLETTM MRKYGVENVS GHFISFNTIC DATQERQDAI 360
  361 YELVEEKIDL MLVVGGWNSS NTSHLQEISE ARGIPSYWID SEKRIGPGNK IAYKLHYGEL 420
  421 VEKENFLPKG PITIGVTSGA STPDKVVEDA LVKVFDIKRE ELLQLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..193] MSA 2.097987 View MSA. Confident ab initio structure predictions are available.
    3 View Details [194..303] deduced N/A No confident structure predictions are available.
    4 View Details [304..466] MSA 5.103967 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle