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Protein Overview: gi|33589748, gi|...

General Information:
Name(s) found: gi|33589748 [NCBI NR]
gi|22328871 [NCBI NR]
gi|18087625 [NCBI NR]
Description(s) found:
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  • gi|33589748|gb|AAQ22640.1| At4g22410/F7K2_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|22328871|ref|NP_193966.2| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18087625|gb|AAL58942.1|AF462856_1 AT4g22410/F7K2_7 [Arabidopsis thaliana] [NCBI NR]
  • At4g22410/F7K2_7 [Arabidopsis thaliana]gi|18087625|gb|AAL58942.1| AT4g22410/F7K2_7 [Arabidopsis thaliana]gi|22328871|ref|NP_193966.2| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ubiquitin carboxyl-terminal hydrolase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ubiquitin carboxyl-terminal hydrolase family protein | chr4:11804085-11806951 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • cysteine-type endopeptidase/ ubiquitin thiolesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g22410/F7K2_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g22410/F7K2_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ubiquitin C-terminal hydrolases superfamily protein | chr4:11804073-11806939 REVERSE LENGTH=510 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT4g22410/F7K2_7 OS=Arabidopsis thaliana GN=At4g22350 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4JL64, AT4g22410/F7K2_7 OS=Arabidopsis thaliana GN=At4g22350 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA][ISS]
    Molecular Function: zinc ion binding [IEA]
    ubiquitin thiolesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLVAKGEG NGNKVKGEAQ VEVDDDEDDD  60
   61 DDASKGRGKH SRHVEVRRDC PYLDTVNRQV LDFDFERFCS VSLSNLNVYA CLVCGKYFQG 120
  121 RSQKSHAYTH SLEAGHHVYI NLLTEKVYCL PDSYEINDPS LDDIRHVLNP RFSRAQVNEL 180
  181 DKNRQWSRAL DGSDYLPGMV GLNNIQKTEF VNVTIQSLMR VTPLRNFFLI PENYQHCKSP 240
  241 LGHRFGELTR KIWHARNFKG QVSPHEFLQA VMKASKKRFR IGQQSDPVEF MSWLLNTLHM 300
  301 DLRTSKDASS IIHKCFQGEL EVVKEYQGNE NKEISRMPFL MLGLDLPPPP LFKDVMEKNI 360
  361 IPQVALFDLL KKFDGETVTE VVRPKLARMR YRVIKSPRYL MFHMVRFKKN NFFKEKNPTL 420
  421 VNFPVKDMEL RDYIPSLPRA PEGENVCSKY NLIANIVHDG KPEDGYFRVF VQRKSQELWY 480
  481 EMQDLHVAET LPQMVELSEA YMQIYEQQEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 14.0 No description for 2g43A was found.
    2 View Details [180..510] PSI-BLAST 62.09691 No description for 2ibiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle