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View Structure Prediction Details

Protein: gi|33589748, gi|...
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33589748, gi|....

Description E-value Query
Range
Subject
Range
gi|23397271, gi|... - gi|23397271|gb|AAN31917.1| unknown protein [Arabidopsis thaliana], gi|145333717|ref|NP_001078426.1| ...
339.0 [0..1] [510..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGEREVKNG VSEEEREVKR KRVMERSDSP PPPLVAKGEG NGNKVKGEAQ VEVDDDEDDD  60
   61 DDASKGRGKH SRHVEVRRDC PYLDTVNRQV LDFDFERFCS VSLSNLNVYA CLVCGKYFQG 120
  121 RSQKSHAYTH SLEAGHHVYI NLLTEKVYCL PDSYEINDPS LDDIRHVLNP RFSRAQVNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 2g43A
Description: No description for 2g43A was found.

Predicted Domain #2
Region A:
Residues: [180-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDKNRQWSRA LDGSDYLPGM VGLNNIQKTE FVNVTIQSLM RVTPLRNFFL IPENYQHCKS  60
   61 PLGHRFGELT RKIWHARNFK GQVSPHEFLQ AVMKASKKRF RIGQQSDPVE FMSWLLNTLH 120
  121 MDLRTSKDAS SIIHKCFQGE LEVVKEYQGN ENKEISRMPF LMLGLDLPPP PLFKDVMEKN 180
  181 IIPQVALFDL LKKFDGETVT EVVRPKLARM RYRVIKSPRY LMFHMVRFKK NNFFKEKNPT 240
  241 LVNFPVKDME LRDYIPSLPR APEGENVCSK YNLIANIVHD GKPEDGYFRV FVQRKSQELW 300
  301 YEMQDLHVAE TLPQMVELSE AYMQIYEQQE E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.09691
Match: 2ibiA
Description: No description for 2ibiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle