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Protein Overview: RQL4A_ARATH

General Information:
Name(s) found: RQL4A_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1188 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: chromosome organization [IMP]
    double-strand break repair via homologous recombination [IGI][IMP]
    [NOT]telomere maintenance [IMP]
    response to DNA damage stimulus [IGI][IMP]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINSNQMSRS HLPEVQKPRG PQTNWSEHAK ALESSSSVTK FLSSNVLYAL ESQKPRDMAA  60
   61 RSIAFPSVNV HTLAHPQISK AWRALSSLSV NNTYLRPGVT PPIDVGTNDS YSARERSTAK 120
  121 VISSTGGSVY SSTRPNLSAM NVSGTGRSFH SFPSSVPGDD KIVAEKFPRG NNEIRESEPS 180
  181 CTHLNGVEKS FGNSAFPAEQ FESRKACLDD MDDDDILENI DVDQIVMEHY HSTSTPQPSV 240
  241 SNFSLRTPPV DRSASRLEEE CNLPPELCSN CSHGIKLGLC PEASTHVEQM KDVLLAISNE 300
  301 LLDDATDLSP DRVGQLRQER LRLKKQIQQL ENHIRDKESQ KSQFLSSTAT RIFQYETPKS 360
  361 TNYKMDQPQT DFRAHVSDQG RYACDSWNTP RDSSFSVDRY GLSSAPVERE QYVPKIIDVT 420
  421 YTEGSNDKKW SSREFPWTRK LEVNNKKVFG NHSFRPNQRE IINATMSGSD VFVLMPTGGG 480
  481 KSLTYQLPAL ICGGITLVIS PLVSLIQDQI MNLLQANIPA ASLSAGMEWA EQLKIFQELN 540
  541 SEHSKYKLLY VTPEKVAKSD SLLRHLENLN SRGLLARFVI DEAHCVSQWG HDFRPDYQSL 600
  601 GILKQKFPNI PVLALTATAT ASVKEDVVQA LGLVNCVVFR QSFNRPNLWY SVVPKTKKCL 660
  661 EDIDKFIKEN HFDECGIIYC LSRMDCEKVS ERLQEFGHKA AFYHGSMEPE QRAFIQTQWS 720
  721 KDEINIICAT VAFGMGINKP DVRFVIHHSL PKSIEGYHQE CGRAGRDGQR SSCVLYYGYG 780
  781 DYIRVKHMIS QGGVDQSPMA TGYNRVASSG RLLETNTENL LRMVRYCENE VECRRFLQLV 840
  841 HLGEKFDSTN CKKTCDNCCS SQSLIDKDVT LITRQLVELV KQTGERFSSA HILEVYRGSL 900
  901 NQMVKKHRHE TLQFHGAGKH LSKIEVSRIL HYLVTEDILV EDVRKSDMYG SVSSLLQVNN 960
  961 AKATILFSGS QTIVMKFPSS VKVLKPSKQG ATAAKGPLTS EKQSTLPLTT EDAPPKDVNL1020
 1021 SANMYTALRK LRTALVKEAP DGVMAYHIFI NSTLQQISRR IPRTKEELLE INGLGKAKVS1080
 1081 KYGDQLLETI ETTVNEYYGT NKKDSIISND SPDSGKRRRD ENISPNVAED DDFEVSPSQS1140
 1141 CKKTVRNKSN EVLHGECIDG DRRGMELDFD FKDEDGSEIR PEGRVLPW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] PSI-BLAST 17.0 Structure of transcription-repair coupling factor
    2 View Details [169..846] PSI-BLAST 40.221849 RecG, N-terminal domain; RecG "wedge" domain; RecG helicase domain
    3 View Details [847..937] PSI-BLAST 16.69897 No description for 2z83A was found.
    4 View Details [938..1016] PSI-BLAST 97.30103 No description for 2v1xA was found.
    5 View Details [1017..1097] PSI-BLAST 21.30103 E. coli RecQ HRDC domain
    6 View Details [1098..1188] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle