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Protein Overview: SYT_DEIRA

General Information:
Name(s) found: SYT_DEIRA [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Threonine--tRNA ligase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=thrS PE=3 SV=1 [Swiss-Prot]
    • Organism: Deinococcus radiodurans R1
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVTLPDGKQ LDLQPGATAL DAAKAIGPRL AQDALGATAN GELTDLMTPL SDGASITLIT  60
   61 KKNPGDAAPL FRHSLGHVMS QAVGEYYKAK GYGPDAIKRG VGPYIENGWY QDFDLPEPLK 120
  121 EEDLPEIEKI MRDIIGRGLD ITRREISKDE ALAQFPHDPY KAELIEGLPD DEPITFYSQG 180
  181 DYTDLCRGPH FPSTGKLPQS FKLMSTSGAY WRGNEKNPIL QRIYGVAFAT QKELDEYLFQ 240
  241 LEEAKRRDHR KLGKELELFT IDPLVGKGLP LWLPNGTVLR EELTNFMKEQ QFQRGYQGVV 300
  301 TPNIGNLDLY RTSGHYPYYS ESQFNPIQVD EEEYMLKPMN CPHHVRIYAS KPRSYRDLPV 360
  361 RLAEFGTVYR YEQSGELNGL TRVRGFTQDD AHIFCRPDQL KREFLDVLDL TVLVLKTFGM 420
  421 TDVRFRVGVR DPESDKYVGD EQNWALAERQ IIEAVEEVGL PYTIEPGDAA FYGPKLDFVV 480
  481 KDVLGREWQL GTIQVDYNLP ERFDISYTGE DGQEHRPIMI HRAPFGSIER FTGILIEHYA 540
  541 GDFPLWLAPR QVMIIPIADR HNAYAEELRE ELHRAGLRAE VDDSSNRMQA KVRDAELHKI 600
  601 PVMLIVGDKE QEAREVSVRE RTGEGTKERK GVKFDELKAE LLERRKNRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..649] PSI-BLAST 118.0 Structure of Staphylococcus aureus threonyl-tRNA synthetase complexed with an analogue of threonyl adenylate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.88410036819636 bayes_pls_golite062009
  • ligase activity
    		•  6.92073480193262 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  6.47381405106149 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
    		•  2.99105702052936 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  2.46505535069103 bayes_pls_golite062009
  • glycine-tRNA ligase activity
    		•  2.29229136935761 bayes_pls_golite062009
  • catalytic activity
    		•  1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
    		•  1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
    		•  1.72215103383322 bayes_pls_golite062009
  • binding
    		•  1.11470390774037 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.0753492604686 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
    		•  0.921492123574877 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.897558352141977 bayes_pls_golite062009
  • DNA binding
    		•  0.854148126675211 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.55217603492525 bayes_pls_golite062009
  • transcription factor activity
    		•  0.283508546234551 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
    		•  0.00572514744734753 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle