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Protein Overview: gi|7473973

General Information:
Name(s) found: gi|7473973 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • pir||E75502 threonine ammonia-lyase (EC 4.3.1.19) DR0567 [similarity] - Deinococcus radiodurans (strain R1) [NCBI NR]
    • Organism: Deinococcus radiodurans
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGLFSAQD SGAPTPDAGR FLGQPSSPAA GGGCDFCPYV LLSLPRFFMS DPRPAPAPAP  60
   61 LPGTLDGMDV LRLALTSQVY GAATETPLSP APRLSERSGN RVLLKREDQQ PIFSFKLRGA 120
  121 YNKMSQLSAE ERARGVICAS AGNHAQGVAF AGEKLGIPAV IVMPATTPDI KVQACRARGA 180
  181 EVILHGDSFS DAETFALALQ QERGLTFVHP YDDPLVLAGQ GTIALELLRQ VEEDDYAVFV 240
  241 PVGGGGLIAG VASILKALKP GVRVIGVEPD DSDAMYQSLQ AGERVRLDTV GIFVDGVAVK 300
  301 QVGAYTFDLT RRYVDDWVRV NTDEVCAAIK DVFDDTRAVL EPAGALSVAG LKKYAATHGL 360
  361 HDRTLVALTC GANINFDRLR HVAERTEIGE QREAILAVTI PERPGAFLEF IELIGSRAIT 420
  421 EFNYRYAPRE DARIFVGVQL GQPGERQELL TLLRGRGYAV LDLTEDELAK VHVRHMVGGR 480
  481 APEAVNERVY AFTFPERPGA LHDFLTQLQG EWNISLFHYR NHGSAHGRVL AGVQVPDAAL 540
  541 TRFGDFLAGL GYPAHDVTSN PAYRLFLT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] PSI-BLAST 76.221849 Cystathionine beta-synthase
    2 View Details [64..568] PSI-BLAST 150.0 THREONINE DEAMINASE (BIOSYNTHETIC) FROM E. COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • acetolactate synthase activity
    		•  6.50887202511626 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  5.28856942236052 bayes_pls_golite062009
  • threonine racemase activity
    		•  4.44340924206787 bayes_pls_golite062009
  • threonine synthase activity
    		•  3.59927532963055 bayes_pls_golite062009
  • cysteine synthase activity
    		•  3.57860549303214 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  3.33109959091277 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
    		•  2.61572425646119 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.99526226543975 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • binding
    		•  1.14906798355281 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • catalytic activity
    		•  0.645256181736122 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • protein binding
    		•  0.341967829237094 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.248470717905239 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle