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Protein Overview: RNH2_PSEAE

General Information:
Name(s) found: RNH2_PSEAE [Swiss-Prot]
Description(s) found:
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  • gi|9949802|gb|AAG07030.1|AE004784_3 ribonuclease HII [Pseudomonas aeruginosa PAO1] [NCBI NR]
  • gi|15598838|ref|NP_252332.1| ribonuclease HII [Pseudomonas aeruginosa PAO1] [NCBI NR]
  • Ribonuclease HII OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rnhB PE=3 SV=1 [Swiss-Prot]
  • ribonuclease HII [Pseudomonas aeruginosa PAO1]gi|9949802|gb|AAG07030.1| ribonuclease HII [Pseudomonas aeruginosa PAO1]gi|37999786|sp|Q9HXY9|RNH2_PSEAE Ribonuclease HII (RNase HII)gi|11352492|pir||B83190 ribonuclease HII PA3642 [imported] - Pseudomonas [nrdb_11152004_Chlamydomonas]
  • ribonuclease HII [Pseudomonas aeruginosa PAO1] [nr-271106-contam.fasta]
  • HII[Pseudomonas aeruginosa PAO1 PAO1-UW] [P_aeruginosa_PAO1_PGD-contam.fasta]
    • Organism: Pseudomonas aeruginosa PAO1
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLGLDFNLV EDLVAGVDEV GRGPLCGPVV TAAVILDPSR PILGLNDSKK LSEARREALF  60
   61 EEIREKALAW CIARAEVEEI DRLNILHATM LAMQRAVEGL SVIPRLALID GNRCPKLAVP 120
  121 CAPVVKGDSQ VPAIAAASIL AKVSRDREMV ELDRVYPGYG MAGHKGYPTA VHLEALSRLG 180
  181 PTPIHRRSFA PVRELLDVSV Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 60.0 Crystal structure of Ribonuclease HII (EC 3.1.26.4) (RNase HII) (tm0915) from THERMOTOGA MARITIMA at 1.74 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribonuclease activity
    		•  3.91517707500372 bayes_pls_golite062009
  • endoribonuclease activity
    		•  3.00008907756136 bayes_pls_golite062009
  • ribonuclease H activity
    		•  2.37346218921366 bayes_pls_golite062009
  • hydrolase activity
    		•  2.30893115816458 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  2.26022264830742 bayes_pls_golite062009
  • nuclease activity
    		•  1.81796593394339 bayes_pls_golite062009
  • endonuclease activity
    		•  1.79009816048707 bayes_pls_golite062009
  • catalytic activity
    		•  1.62277843225829 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.48827607538468 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.34153791988846 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  0.8085201347205 bayes_pls_golite062009
  • exonuclease activity
    		•  0.39213900591465 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.13187450705887 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle