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Protein Overview: gi|49611795, gi|...

General Information:
Name(s) found: gi|50121269 [NCBI NR]
gi|49611795 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|50121269|ref|YP_050436.1| nicotinamidase/pyrazinamidase [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
  • gi|49611795|emb|CAG75244.1| pyrazinamidase/nicotinamidase [includes: pyrazinamidase nicotinamidase] [Pectobacterium atrosepticum SCRI1043] [NCBI NR]
    • Organism: Pectobacterium atrosepticum SCRI1043
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKALLLVDL QNDFCPEGAL AVNEGDRVIE VANRAIDACL AAGVAVIASQ DWHPTNHGSF  60
   61 AVNANTKVGE IGELNGWPQI WWPVHCVQGT TGADFHPALN QSAIQWIVQK GTQPEIDSYS 120
  121 AFFDNGHRVK TELDAWLRAN HITHLTILGL ATDYCIKFSV LDAIALGYHT EVLVDGCRGV 180
  181 NLSPDDSESA LQEMAQRGAT LTDMTQFLTT LSSVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 47.69897 Pyrazinamidase/nicotinamidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinamidase activity
    		•  2.590271821288 bayes_pls_golite062009
  • binding
    		•  1.80707112356899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.33901087189475 bayes_pls_golite062009
  • catalytic activity
    		•  0.992051062697807 bayes_pls_golite062009
  • protein binding
    		•  0.343971697425971 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle