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Protein Overview: gi|30259913, gi|...

General Information:
Name(s) found: gi|30265236 [NCBI NR]
gi|30259913 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30265236|ref|NP_847613.1| spermidine synthase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259913|gb|AAP29099.1| spermine/spermidine synthase family protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 360 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polyamine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKHRKQSKI KIYRITNYKK DKRSELDSNK FELEQQAVEN KQDKQGKQDN QVQSENVVIV  60
   61 PTDSHNLDIW DEISLKEIQA GEHTNLFAEQ SNYQNINLLQ VSDIRLYLDK QLQFSSVDEQ 120
  121 IYHEALVHPI MSKVIDPKRV LILGGGDGLA LREVLKYETV LHVDLVDLDG SMIDMARNVP 180
  181 ELVSLNKSAF FDNRVNTHVC DAKEFLSSPS SLYDVIIIDF PDPATELLST LYTSELFARI 240
  241 ATFLTEDGAF VCQSNSPADA PLVYWSIGNT IEHAGLTVKS YHTIVPSFGT DWGFHIAANS 300
  301 VYVLDQIEQL YVVPTPRTLP SLLFPLFQFK EEHLEQRNFA LLNSESNLIL HQCYKKEMEF 360
  361

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..360] PSI-BLAST 61.39794 X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • spermidine synthase activity
    		•  2.38563015463215 bayes_pls_golite062009
  • catalytic activity
    		•  1.62377578202456 bayes_pls_golite062009
  • transferase activity
    		•  1.27388514102581 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.14636302691827 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.12602040164126 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.535429947810431 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle