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Protein Overview: gi|30263448, gi|...

General Information:
Name(s) found: gi|30263448 [NCBI NR]
gi|30258083 [NCBI NR]
Description(s) found:
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  • gi|30263448|ref|NP_845825.1| cytoplasmic alpha-amylase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30258083|gb|AAP27311.1| alpha-amylase [Bacillus anthracis str. Ames] [NCBI NR]
  • alpha-amylase [Bacillus anthracis str. Sterne]gi|47528835|ref|YP_020184.1| alpha-amylase [Bacillus anthracis str. 'Ames Ancestor']gi|30263448|ref|NP_845825.1| alpha-amylase [Bacillus anthracis str. Ames]gi|30258083|gb|AAP27311.1| alpha-amylase [Bacillu [nrdb_11152004_Chlamydomonas]
  • alpha-amylase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
  • cytoplasmic alpha-amylase [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [ISSLink to PubMed article]
    Molecular Function: alpha-amylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKKITIVGL SVVLFLPSIY GESKVYADTI NNGTLMQYFE WYAPSDRNHW NRLRTDAENL  60
   61 AQKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT VRTKYGTKAQ LKSAIEALHK 120
  121 QNIDVYGDVV MNHKGGADYT ETVTAVEVDR NNRNVEVSGD YEISAWTGFN FPGRGDNYSN 180
  181 FKWKWYHFDG TDWDEGRKLN RIYKFRGIGK AWDWEVSSEN GNYDYLMYAD LDFDHPDVAN 240
  241 EMKNWGTWYA NELNLDGFRL DAVKHIDHEY LRDWVNHVRQ QTGKEMFTVA EYWQNDIQTL 300
  301 NNYLAKVNYN QSVFDAPLHY NFHYASKGNG NYDMRNILNG TVMQNHPALA VTLVENHDSQ 360
  361 PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTS GNSSYEIPAL KDKIDPILTA 420
  421 RKNFAYGTQR DYLDHPDVIG WTREGDSVHA NSGLATLISD GPGGSKWMDV GKNNAGEVWH 480
  481 DMTGNQTNTV TINKDGWGQF HVSGGSVSIY VQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..513] PSI-BLAST 89.69897 Bacterial alpha-Amylase; Bacterial alpha-amylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • hydrolase activity
    		•  1.107656067558 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle