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Protein Overview: gi|30256618, gi|...

General Information:
Name(s) found: gi|30261992 [NCBI NR]
gi|30256618 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261992|ref|NP_844369.1| polysaccharide deacetylase, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256618|gb|AAP25855.1| polysaccharide deacetylase, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [ISSLink to PubMed article]
    Molecular Function: deacetylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYFYSPEGF APYQWELERD VSYAYMPYNL FYYGDYIRIL PYTSIPQSYE VQMKADERGS  60
   61 WTPFSWVEKY AYAFSGPYNK AEVALTFDDG PDLEFTPKIL DKLKQHNVKA TFFLLGENAE 120
  121 KFPNVVKRIA NEGHVIGNHT YSHPNLAKVN DAEYRNQIIK TEEILNRLAG YAPKFIRPPY 180
  181 GEILEDQLKW ATEQNFMIVQ WSVDTVDWKG VSADTITNNV LGNSFPGSVI LQHSTPGGHL 240
  241 QGSVEALDKI IPQLKTKGAR FVTLPSMFQT SKERK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] PSI-BLAST 47.522879 Structure of Streptococcus pneumoniae peptidoglycan deacetylase ( SpPgdA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.54926008475976 bayes_pls_golite062009
  • deacetylase activity
    		•  1.07373873416936 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  1.04159714419468 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.78725677170464 bayes_pls_golite062009
  • hydrolase activity
    		•  0.7139390771237 bayes_pls_golite062009
  • mannosidase activity
    		•  0.32530435999467 bayes_pls_golite062009
  • binding
    		•  0.097268039040833 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle