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Protein Overview: gi|30261502, gi|...

General Information:
Name(s) found: gi|30261502 [NCBI NR]
gi|30255356 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30261502|ref|NP_843879.1| isopropylmalate isomerase large subunit [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255356|gb|AAP25365.1| 3-isopropylmalate dehydratase, large subunit [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: leucine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-isopropylmalate dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRLLDKLW ERHVVTTNEN GLDLLYIDLH LVHEVTSPQA FEGLRLTNRT VRRPDLTFAT  60
   61 MDHNIPTKDV WNITDRIAKQ QLDTLRENCK QFQVPLADIG DEEQGIVHVI GPELGLTQPG 120
  121 KTIVCGDSHT ATHGAFGALA FGIGTSEVEH VLATQTLWQR KPKAMGIELK GKLQKGVYAK 180
  181 DIILHLLSKY GVAVGTGYVM EFYGETIGTM EMEERMTLCN MAIEGGAKAG IIAPDEKTFA 240
  241 YVKGRKYAPR DYETFEKKWF ELYTDADAIY DLHISIDVTD LAPYVTWGTN PSMGVRIDEK 300
  301 LPEKHDVNDE RAFSYMGLIP GQSTYDIPVQ HVFIGSCTNS RLSDLEIAAS VVKGRKVKEG 360
  361 VRALVVPGSK RVRDAAMQKG LHHIFEEAGF EWREPGCSMC LGMNPDQVPE GEHCASTSNR 420
  421 NFEGRQGKGA RTHLVSPAMA AAAALYGHFV DIRKESYDGA ISYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..464] PSI-BLAST 141.0 Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  11.6597692115322 bayes_pls_golite062009
  • catalytic activity
    		•  2.4040324437254 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  2.08349115784849 bayes_pls_golite062009
  • hydro-lyase activity
    		•  2.04845291489052 bayes_pls_golite062009
  • lyase activity
    		•  2.0080619912194 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.952569345633996 bayes_pls_golite062009
  • aconitate hydratase activity
    		•  0.681826117995502 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0023376634609541 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle