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Protein Overview: gi|30261325, gi|...

General Information:
Name(s) found: gi|30261325 [NCBI NR]
gi|30255179 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261325|ref|NP_843702.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255179|gb|AAP25188.1| dTDP-glucose 4,6-dehydratase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: O antigen biosynthetic process [ISSLink to PubMed article]
    dTDP-rhamnose biosynthetic process [ISSLink to PubMed article]
    Molecular Function: dTDP-glucose 4,6-dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILVTGGAG FIGSNFVHYM LQSYETYKII NFDALTYSGN LNNVKSIQDH PNYYFVKGEI  60
   61 QNGELLEHVI KERDVQVIVN FAAESHVDRS IENPIPFYDT NVIGTVTLLE LVKKYPHIKL 120
  121 VQVSTDEVYG SLGKTGRFTE ETPLAPNSPY SSSKASADMI ALAYYKTYQL PVIVTRCSNN 180
  181 YGPYQYPEKL IPLMVTNALE GKKLPLYGDG LNVRDWLHVT DHCSAIDVVL HKGRVGEVYN 240
  241 IGGNNEKTNV EVVEQIITLL GKTKKDIEYV TDRLGHDRRY AINAEKMKNE FDWEPKYTFE 300
  301 QGLQETVQWY EKNEEWWKPL KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..322] PSI-BLAST 91.30103 Crystal Structure of DesIV (dTDP-glucose 4,6-dehydratase) from Streptomyces venezuelae with NAD and TYD bound

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
    		•  2.13934644118967 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • steroid dehydrogenase activity
    		•  1.75109362865449 bayes_pls_golite062009
  • steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.55012034958204 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.868888700854563 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • DNA binding
    		•  0.790382977752475 bayes_pls_golite062009
  • binding
    		•  0.784517759335365 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
    		•  0.11102650759187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle