YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30260784, gi|...

General Information:
Name(s) found: gi|30260784 [NCBI NR]
gi|30254233 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|30260784|ref|NP_843161.1| trehalose operon transcriptional repressor [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30254233|gb|AAP24647.1| trehalose operon transcriptional repressor [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: trehalose transport [ISSLink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    Molecular Function: specific transcriptional repressor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSKYEQIYT AISKSIDNKQ LKEGCKIPSE TELMKQYEAS RGTVRKAVDL LQERGYVQKI  60
   61 HGKGVFVLKR KNIEFNFGGI VSFQEENERL GRHCITEVVE IEKIKATKEI AKLLNVKEKT 120
  121 EIDHIKRVRN IDGEKVILDI NHFVSEHIPG LTSEIAAGSI YKYIEKELGL HISYSQRVIE 180
  181 VQSCTEDDRK YLDLNGTDYV VVVKNFTHFY DGSQFEYTES RHRLDIFHFS DVARRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 34.522879 No description for 2ra5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.67337973971815 bayes_pls_golite062009
  • DNA binding
    		•  2.4285792703914 bayes_pls_golite062009
  • transcription factor activity
    		•  2.41410286768641 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.36311807645798 bayes_pls_golite062009
  • binding
    		•  1.53283393165662 bayes_pls_golite062009
  • catalytic activity
    		•  0.43947186099223 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle