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Protein Overview: gi|30260589, gi|...

General Information:
Name(s) found: gi|30260589 [NCBI NR]
gi|30253957 [NCBI NR]
Description(s) found:
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  • gi|30260589|ref|NP_842966.1| fumarate hydratase, class I [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253957|gb|AAP24452.1| fumarate hydratase, class I [Bacillus anthracis str. Ames] [NCBI NR]
  • fumarate hydratase, class I [Bacillus anthracis str. Sterne]gi|47525699|ref|YP_017048.1| fumarate hydratase, class I [Bacillus anthracis str. 'Ames Ancestor']gi|30260589|ref|NP_842966.1| fumarate hydratase, class I [Bacillus anthracis str. Ames]gi|2139 [nrdb_11152004_Chlamydomonas]
  • fumarate hydratase, class I [Bacillus anthracis str. Ames] [nr-271106-contam.fasta]
    • Organism: Bacillus anthracis str. Ames
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: fumarate hydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLQESMYQ LIVETSTNLP KDVRRAIQQA KERENAGTRS AMALGTITNN IKMADDNISP  60
   61 ICQDTGMPTF KIYTPVGVNQ LKLKEAIYHA LERATKDGKL RPNSVDSLFG DNSGNNLGPG 120
  121 TPVIKFEQWE KDYIDARLIL KGGGCENKNI QYSLPCELEG LGRAGRDLEG IRKCLLHAVY 180
  181 QAQGQGCSAG VIGVGIGGDR TSGYELAKNQ LFRTLDDVNP IPELQQLEEY VLENANKLGI 240
  241 GTMGFGGETT LLGCKIGVYN RLPASFYVSV AYNCWAYRRL GVTIHPETGE IMDWLYQEGD 300
  301 DTLQQEAQEK TEQREIVLQA PITEEQIRKL RVGDVVTING MMYTGRDAIH KHLMDNDCPV 360
  361 DLNGQVIYHC GPVVVKDEND NWQIKAAGPT TSIREEPYQG DIMKKFGIRA VIGKGGMGAK 420
  421 TLAALEEHGG VYLNAIGGAA QYYAECIKEV KDVDFLQFGI PEAMWHLRIE GFKAVVTMDS 480
  481 HGNSLHADVD KTSLEKLASF KEPVFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] MSA 1.052983 View MSA. No confident structure predictions are available.
    2 View Details [98..288] MSA 1.052949 View MSA. No confident structure predictions are available.
    3 View Details [289..506] PSI-BLAST 61.39794 No description for 2isbA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • fumarate hydratase activity
    		•  4.07646355358082 bayes_pls_golite062009
  • catalytic activity
    		•  1.02123395223799 bayes_pls_golite062009
  • hydro-lyase activity
    		•  0.556078290190932 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.338858403016763 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle