YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|49177313, gi|...

General Information:
Name(s) found: gi|49183386 [NCBI NR]
gi|49177313 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|49183386|ref|YP_026638.1| PTS system, IIBC component [Bacillus anthracis str. Sterne] [NCBI NR]
  • gi|49177313|gb|AAT52689.1| PTS system, IIBC component [Bacillus anthracis str. Sterne] [NCBI NR]
    • Organism: Bacillus anthracis str. Sterne
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITSFDFWQ KFGKALLVVV AVMPAVGLMI SIGKLIGMSA GDINAVHTIA RVMEDIGWAI  60
   61 ITNLHILFAV AIGGSWAKDR AGGAFAALLA FVLTNRITGA IFGVNAEMLA DSKAKVSSVL 120
  121 AGDLIVKDYF TSVLGAPALN MGVFVGIITG FLGATLYNKY YNYNKLPQAL AFFNGKRFVP 180
  181 FVVIVWSTVT AIVLSLLWPF IQSGLNEFGR WIAASKDSAP VVAPFVYGTL ERLLLPFGLH 240
  241 HMLTIPMNYT ELGGTYTMLT GSKIGQVVAG QDPLWLAWIT DLNNLLANGD TKAYNDLLNN 300
  301 VVPARFKAGQ VIGSTAALMG IAFAMFRNVD KEKRAKYKPM FLSAALAVFL TGVTEPIEFM 360
  361 FMFIAPVLYV VYAITTGLAF ALADLINLRV HAFGFIELIT RTPMMVNAGL TRDLINFVIV 420
  421 SLVFFGLNFT LFNFLIKKFN LPTPGRAGNY IDNEDEASEG TGNVQEGSLA TKVIDLLGGK 480
  481 ENIADVDACM TRLRVTVKDL DVVAPEAQWK QNGALGLIVK DKGVQAVYGP KADVLKSDIQ 540
  541 DMLGA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] MSA 3.408996 View MSA. No confident structure predictions are available.
    2 View Details [142..393] PSI-BLAST 3.69897 No description for 2ht2A was found.
    3 View Details [394..545] PSI-BLAST 21.30103 Glucose permease domain IIB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  1.40104538148014 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.27040739514162 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.99765601803889 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.87653733645387 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.67051140447735 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.64978720715189 bayes_pls_golite062009
  • channel activity
    		•  0.37948130863591 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.37948130863591 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.374530204979559 bayes_pls_golite062009
  • ion channel activity
    		•  0.30974369003321 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.61117010765727 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle