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Protein Overview: gi|30260419, gi|...

General Information:
Name(s) found: gi|30260419 [NCBI NR]
gi|30253740 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30260419|ref|NP_842796.1| homogentisate 1,2-dioxygenase, putative [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253740|gb|AAP24282.1| homogentisate 1,2-dioxygenase, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: L-phenylalanine catabolic process [ISSLink to PubMed article]
    tyrosine catabolic process [ISSLink to PubMed article]
    Molecular Function: homogentisate 1,2-dioxygenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYRHMGELP HKRHVQFRKK DGSLYREQVM GTKGFSGTQS ILYHHYMPTE VGHAALSHSC  60
   61 QLQYEEDVVL SHRHFRTKEN KKSGDAVSGR NFILGNEDLL IGVVTPTEKM NYFYRNGDGD 120
  121 EMLFVHYGTG KIETMFGTIH YRKGDYVTIP IGTIYRVIPD EGETKFLVVE ANSQITTPRR 180
  181 YRNEYGQLLE HSPFCERDIR GPEKLETYDE KGEFVVMTKS RGYMHKHVLG HHPLDVVGWD 240
  241 GYLYPWVFNV EDFEPITGRI HQPPPVHQTF EGHNFVICSF VPRLYDYHPE SIPAPYYHSN 300
  301 VNSDEVLYYV EGNFMSRKGV EEGSITLHPS GIPHGPHPGK TEASIGKKET LELAVMIDTF 360
  361 RPLRIVKQAH ETEDEKYMYS WIEEGSYTVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..390] PSI-BLAST 153.0 Homogentisate dioxygenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  2.65960759413149 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  2.611114803333 bayes_pls_golite062009
  • homogentisate 1,2-dioxygenase activity
    		•  2.36574960723119 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.930778069601015 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle