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Protein Overview: gi|30260219, gi|...

General Information:
Name(s) found: gi|30260219 [NCBI NR]
gi|30253540 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30260219|ref|NP_842596.1| lysine decarboxylase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30253540|gb|AAP24082.1| lysine decarboxylase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid metabolic process [ISSLink to PubMed article]
    Molecular Function: lysine decarboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNRIPLYE ALIEFKERRR LSFHVPGHKN GLNFPQEVVE EFKDILSIDV TELSGLDDLH  60
   61 SPFECIDEAQ QLLADVYGVN KSYFLINGST VGNLAMILSC CGEHDIVLVQ RNCHKSIING 120
  121 LKLAGANPIF LDPWIDEAYN VPVGIHDEII KEAIEKYPNA KALILTHPNY YGMGMDLEAS 180
  181 IAYAHTHKIP VLVDEAHGAH FCLGGAFPQS ALAYGADMVV HSAHKTLPAM TMGSYLHINS 240
  241 RLVKEEKVST YLSMLQSSSP SYPIMASLDI ARFTIARIKE KGHDEIVEFL QEFKEELSTI 300
  301 PQIAILQYPL QDGLKITVQT RCRLSGYELQ SVFEKVGIYT EMADPYNVLF ILPLQVNKKY 360
  361 MKAIEMIRVA LQYYEVKDKT ESIRYTYKGE ISPLPYTYKQ LEEYETKVVP IEEAVGMVAA 420
  421 EMVIPYPPGI PLIMYGERIT SGHKEQIMYL EKAGARFQGS RKYMKVYDIE SRF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..473] PSI-BLAST 46.522879 Ornithine decarboxylase N-terminal "wing" domain; Ornithine decarboxylase major domain; Ornithine decarboxylase C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.66922865456094 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.85532625717753 bayes_pls_golite062009
  • transaminase activity
    		•  1.83482013760414 bayes_pls_golite062009
  • transferase activity
    		•  0.93810038069762 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  0.520614909745139 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  0.520614909745139 bayes_pls_golite062009
  • lyase activity
    		•  0.0414385380659299 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle