YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|39984593, gi|...

General Information:
Name(s) found: gi|39997701 [NCBI NR]
gi|39984593 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|39997701|ref|NP_953652.1| prephenate dehydrogenase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39984593|gb|AAR35979.1| prephenate dehydrogenase [Geobacter sulfurreducens PCA] [NCBI NR]
  • prephenate dehydrogenase [Geobacter sulfurreducens PCA]gi|39984593|gb|AAR35979.1| prephenate dehydrogenase [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • prephenate dehydrogenase [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: prephenate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSVPFIRR LAVIGVGLIG GSLARALRTA GAVGEIIGID RDEANLRQAA ELGVVDRAAA  60
   61 TVAEGVAGAD MVFLSVPVRA MAGVVREIAP HLAAGCIVTD GGSVKAEVVA ACDPLMPAGT 120
  121 CFVGGHPIAG TEHSGVGASF ATLYQGKRCI LTPAATTDRD ALATVARMWE AAGSEVVLMD 180
  181 PEKHDRVVAA ISHLPHMVAY ALVNAVEGYD RFEESILRYS AGGFRDFTRI ASSDPAMWRD 240
  241 IALMNREGVL EMMDHFAAYF GQLRSLVAAG DAEGLERFFR DSKESRDAIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 40.30103 Crystal Structure of Prephenate Dehydrogenase from Aquifex aeolicus

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.16785883389468 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.95477050413 bayes_pls_golite062009
  • prephenate dehydrogenase activity
    		•  1.03016160419952 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.771153340292 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.66554302844944 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle