YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39984593, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSVPFIRR LAVIGVGLIG GSLARALRTA GAVGEIIGID RDEANLRQAA ELGVVDRAAA  60
   61 TVAEGVAGAD MVFLSVPVRA MAGVVREIAP HLAAGCIVTD GGSVKAEVVA ACDPLMPAGT 120
  121 CFVGGHPIAG TEHSGVGASF ATLYQGKRCI LTPAATTDRD ALATVARMWE AAGSEVVLMD 180
  181 PEKHDRVVAA ISHLPHMVAY ALVNAVEGYD RFEESILRYS AGGFRDFTRI ASSDPAMWRD 240
  241 IALMNREGVL EMMDHFAAYF GQLRSLVAAG DAEGLERFFR DSKESRDAIL

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	290	0.99