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Protein Overview: gi|39983848, gi|...

General Information:
Name(s) found: gi|39996960 [NCBI NR]
gi|39983848 [NCBI NR]
Description(s) found:
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  • gi|39996960|ref|NP_952911.1| keto/oxoacid ferredoxin oxidoreductase subunit [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983848|gb|AAR35238.1| keto/oxoacid ferredoxin oxidoreductase subunit [Geobacter sulfurreducens PCA] [NCBI NR]
  • keto/oxoacid ferredoxin oxidoreductase subunit [Geobacter sulfurreducens PCA]gi|39983848|gb|AAR35238.1| keto/oxoacid ferredoxin oxidoreductase subunit [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • keto/oxoacid ferredoxin oxidoreductase subunit [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 67 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on iron-sulfur proteins as donors [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQIEIDESR CKGCGLCTLA CSRKLIVMSS TINKYGYVTA VMTSQDQCTG CALCAEICPD  60
   61 VAIKVYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] PSI-BLAST 13.39794 Pyruvate-ferredoxin oxidoreductase, PFOR, domain I; Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI; Pyruvate-ferredoxin oxidoreductase, PFOR, domain II; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III; Pyruvate-ferredoxin oxidoreductase, PFOR, domain V

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  1.96335238768634 bayes_pls_golite062009
  • electron carrier activity
    		•  1.80821147571665 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  1.52708302196048 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  1.34194069643424 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  1.01522839124481 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  1.00909748207872 bayes_pls_golite062009
  • catalytic activity
    		•  0.858923918006343 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.62952479827273 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  0.13956405004608 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle