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Protein Overview: PANC_GEOSL

General Information:
Name(s) found: PANC_GEOSL [Swiss-Prot]
Description(s) found:
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  • gi|39996806|ref|NP_952757.1| pantoate--beta-alanine ligase [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39983694|gb|AAR35084.1| pantoate--beta-alanine ligase [Geobacter sulfurreducens PCA] [NCBI NR]
  • Pantothenate synthetase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=panC PE=3 SV=1 [Swiss-Prot]
  • pantoate--beta-alanine ligase [Geobacter sulfurreducens PCA]gi|39983694|gb|AAR35084.1| pantoate--beta-alanine ligase [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • pantoate--beta-alanine ligase [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pantothenate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: pantoate-beta-alanine ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIIDSVADM QAFSRDARRS GKTIALVPTM GYLHDGHASL MREGRTRADI LVVSIFVNPT  60
   61 QFGPNEDFTT YPRDLERDLQ VAEAAGADVI FAPRADDMYP AGFQTYVDVE KVTLPLCGAS 120
  121 RPGHFRGVTT VVAKLFNIVM PHTAFFGKKD FQQLAVIRRM VADLNMDLSI VGMPIIREPD 180
  181 GLAMSSRNAY LGPQERTNAL CLNRSLAAAR TLFTDGERSV ARLRDTVLRI LTEVPGAAID 240
  241 YADFRDSETL EPVEAANEKT LLALAVKIGT TRLIDNCVLG EEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 116.0 Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  5.66762539052452 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  5.66762539052452 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  5.65398773296369 bayes_pls_golite062009
  • ligase activity
    		•  4.61911329839139 bayes_pls_golite062009
  • pantoate-beta-alanine ligase activity
    		•  2.65346774278189 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  2.21467185575886 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.64840822019417 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  1.59260025359667 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  1.47110858685627 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.38579849961344 bayes_pls_golite062009
  • pantetheine-phosphate adenylyltransferase activity
    		•  1.25694296916214 bayes_pls_golite062009
  • binding
    		•  1.11291710031577 bayes_pls_golite062009
  • adenylyltransferase activity
    		•  1.08055019963499 bayes_pls_golite062009
  • transferase activity
    		•  1.06817715108743 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
    		•  0.725178047574893 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  0.722005407734432 bayes_pls_golite062009
  • nicotinate-nucleotide adenylyltransferase activity
    		•  0.692499879958128 bayes_pls_golite062009
  • nicotinamide-nucleotide adenylyltransferase activity
    		•  0.567882194154248 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  0.564359271862248 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
    		•  0.430902479559327 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle