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Protein Overview: gi|39996130, gi|...

General Information:
Name(s) found: gi|39996130 [NCBI NR]
gi|39982895 [NCBI NR]
Description(s) found:
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  • gi|39996130|ref|NP_952081.1| glycosy hydrolase family protein [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982895|gb|AAR34354.1| glycosyl hydrolase, family 10 [Geobacter sulfurreducens PCA] [NCBI NR]
  • glycosyl hydrolase, family 10 [Geobacter sulfurreducens PCA]gi|39982895|gb|AAR34354.1| glycosyl hydrolase, family 10 [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • glycosyl hydrolase, family 10 [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 294 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nitrogen compound metabolic process [ISSLink to PubMed article]
    Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLSVALVQ QSCTADKDLN LAKSIENIRK ASVLGAKLVV LQELHTGPYF CQNEDTAHFD  60
   61 LAEPIPGPTT ELLGGVAKEF GVVLVSSLFE RRAPGLYHNT AVVFEKDGSM AGTYRKMHIP 120
  121 DDPGYYEKFY FTPGDLGFEP IRTSVGKLGV LVCWDQWYPE AARLMALAGA DLLIYPTAIG 180
  181 WDPRDDDDEK IRQKEAWITI QRGHAVANGI PVVSVNRVGH ESDPSGVLPG SQFWGSSFVA 240
  241 GPQGEILAQA SNDGEELLIT ELDLARSEAV RRIWPFLRDR RIDAYGDLLR RYRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..294] PSI-BLAST 58.0 hypothetical protein yl85

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.64442398754697 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.35962310800332 bayes_pls_golite062009
  • N-carbamoylputrescine amidase activity
    		•  0.749539597459006 bayes_pls_golite062009
  • hydrolase activity
    		•  0.06604196264626 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle