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Protein Overview: gi|39982072, gi|...

General Information:
Name(s) found: gi|39995310 [NCBI NR]
gi|39982072 [NCBI NR]
Description(s) found:
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  • gi|39995310|ref|NP_951261.1| isoquinoline 1-oxidoreductase, alpha subunit [Geobacter sulfurreducens PCA] [NCBI NR]
  • gi|39982072|gb|AAR33534.1| isoquinoline 1-oxidoreductase, alpha subunit [Geobacter sulfurreducens PCA] [NCBI NR]
  • isoquinoline 1-oxidoreductase, alpha subunit [Geobacter sulfurreducens PCA]gi|39982072|gb|AAR33534.1| isoquinoline 1-oxidoreductase, alpha subunit [Geobacter sulfurreducens PCA] [nrdb_11152004_Chlamydomonas]
  • isoquinoline 1-oxidoreductase, alpha subunit [Geobacter sulfurreducens PCA] [nr-271106-contam.fasta]
    • Organism: Geobacter sulfurreducens PCA
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVFLVNGKE QRVDVSPDTP LLWVLRDKLG LTGTKYGCGE GLCGACTVHI DGRPERSCIT  60
   61 PVGDVQGKKV VTIEGIPENH PVKKSWLAQD VSQCGYCQPG QIMSAVALLA SKPSPTDADI 120
  121 DSAMSGNLCR CGTYGRIRRA IHAAGGRRAR KGGSRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] PSI-BLAST 39.69897 Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain; Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • electron carrier activity
    		•  1.8452767229444 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.29798120961328 bayes_pls_golite062009
  • catalytic activity
    		•  0.475559813757564 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle