YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ATPF_COXBU

General Information:
Name(s) found: ATPF_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • ATP synthase subunit b OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=atpF PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [ISSLink to PubMed article]
    Biological Process: ATP synthesis coupled proton transport [ISSLink to PubMed article]
    Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDINASLIVQ MLVFVVFIGL TMKFIWPPLT KALEARRKNI ADGLAAAEEG RKELELAEIK  60
   61 SKEQLTEAKT QAAHIIEQAN QRANHIVEEA KNKAREEGAH LIQLAKNEIE QEYNAAKTEL 120
  121 LKQISTIAVA GAQKILQREV DKASNDRLVD ELVSEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] MSA 3.374996 View MSA. No confident structure predictions are available.
    2 View Details [67..156] PSI-BLAST 4.0 F1F0 ATP synthase subunit B, membrane domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  13.4958765229456 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  11.6977167590263 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  9.95066935525283 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  8.85439283401521 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  5.13805155650973 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.04374327766634 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.64120459994573 bayes_pls_golite062009
  • transporter activity
    		•  2.93091397928047 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.82224868778929 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.79688978937497 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle