YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LOLB_COXBU

General Information:
Name(s) found: LOLB_COXBU [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Outer-membrane lipoprotein LolB OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=lolB PE=1 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein secretion [ISSLink to PubMed article]
    Molecular Function: protein transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLISNNEER SLRVRYCIAI ALSALLISGC TTLRLPNQST SVYHQQTWAQ RYYDLSRISQ  60
   61 WNIDGAFSIQ QPGKTIIAAY DWQQKGMNYR IRIHSSLDIY SVNISGRPGM VTLWRSPRQH 120
  121 YTASTPEQLM QQQLGWQLPL SNLYYWIRGI PAPGAYQADF DTYTHLIALQ QSGWHIRFSQ 180
  181 YTTVGSVDLP RTLQLSNGSL AVKIVVKHWQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 56.522879 Outer membrane lipoprotein receptor LolB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  2.94733677676109 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  2.80163572604854 bayes_pls_golite062009
  • transporter activity
    		•  1.94557075462337 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.8285077384404 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.57976971135135 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.4723961195197 bayes_pls_golite062009
  • protein binding
    		•  1.38954552030231 bayes_pls_golite062009
  • binding
    		•  1.0696248685847 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle