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Protein Overview: gi|29540989, gi|...

General Information:
Name(s) found: gi|29653726 [NCBI NR]
gi|29540989 [NCBI NR]
Description(s) found:
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  • gi|29653726|ref|NP_819418.1| anhydro-N-acetylmuramyl-tripeptide amidase [Coxiella burnetii RSA 493] [NCBI NR]
  • gi|29540989|gb|AAO89932.1| anhydro-N-acetylmuramyl-tripeptide amidase [Coxiella burnetii RSA 493] [NCBI NR]
  • N-acetylmuramoyl-L-alanine amidase [Coxiella burnetii RSA 493]gi|29540989|gb|AAO89932.1| N-acetylmuramoyl-L-alanine amidase [Coxiella burnetii RSA 493] [nrdb_11152004_Chlamydomonas]
  • N-acetylmuramoyl-L-alanine amidase [Coxiella burnetii RSA 493] [nr-271106-contam.fasta]
    • Organism: Coxiella burnetii RSA 493
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan metabolic process [ISSLink to PubMed article]
    Molecular Function: N-acetylmuramoyl-L-alanine amidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYEINLNYP AKNFDKRIRF LVLHYTAKNF EDSLEILTQE AFGVSGHYLI PESSIDGKKQ  60
   61 IFQLVPEKHR AWHAGVSAWQ GRIHLNDTSI GIEIVNLGYQ EEGEKRRWFP FLDYQIELII 120
  121 ELAKDIIERY QLHPTCVVGH SDISPERKAD PGPLFPWKKL YEQGIGAWYE DECKKEMERR 180
  181 LSNETTDIRW LQRHLKTYGY SIEETGELDK KTQQVVCAFQ MHFRPTDYSG IPDKETYAIL 240
  241 YALVKKYFPE KVSSPLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 56.221849 No description for 2bgxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • N-acetylmuramoyl-L-alanine amidase activity
    		•  5.29207604418857 bayes_pls_golite062009
  • peptidoglycan binding
    		•  5.10635543502728 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  3.20235326428146 bayes_pls_golite062009
  • N-acetyl-anhydromuramoyl-L-alanine amidase activity
    		•  1.8723848738588 bayes_pls_golite062009
  • pattern binding
    		•  1.3169647365105 bayes_pls_golite062009
  • hydrolase activity
    		•  1.08510134637257 bayes_pls_golite062009
  • catalytic activity
    		•  0.628556091191359 bayes_pls_golite062009
  • receptor activity
    		•  0.165305685738616 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle