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Protein Overview: RPIA_COXBU

General Information:
Name(s) found: RPIA_COXBU [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Ribose-5-phosphate isomerase A OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=rpiA PE=3 SV=1 [Swiss-Prot]
    • Organism: Coxiella burnetii RSA 493
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pentose-phosphate shunt, non-oxidative branch [ISSLink to PubMed article]
    Molecular Function: ribose-5-phosphate isomerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNELKKAA AMEAIQFVKN VNIVGVGTGS TVNYFIDALA EIKHQIEGAV ASSVATENRL  60
   61 KEHRIPVVDL NSVSNVDVYV DGADEFNKHF YLTKGGGGAL TREKIIAAAA KRFICIVDES 120
  121 KQVDVLGQFP LPIEVIPMAR SFVAREIVKL KGDPVYRQGF TTDNGNVILD IHNLTILNPV 180
  181 ELEAILNNIP GVIANGLFAQ QPADDLLIGT PAGVQLHHRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 66.522879 D-ribose-5-phosphate isomerase (RpiA), catalytic domain; D-ribose-5-phosphate isomerase (RpiA), lid domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribose-5-phosphate isomerase activity
    		•  2.23318567990318 bayes_pls_golite062009
  • 6-phosphogluconolactonase activity
    		•  1.97756803122763 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.61058174487002 bayes_pls_golite062009
  • catalytic activity
    		•  0.424959044318554 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.281224782944976 bayes_pls_golite062009
  • binding
    		•  0.228090098582514 bayes_pls_golite062009
  • glucosamine-6-phosphate deaminase activity
    		•  0.111185777194415 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.075853172283603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle