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Protein Overview: gi|24351260, gi|...

General Information:
Name(s) found: gi|24376205 [NCBI NR]
gi|24351260 [NCBI NR]
Description(s) found:
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  • gi|24376205|ref|NP_720249.1| lysophospholipase L2 [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351260|gb|AAN57692.1|AE015905_4 lysophospholipase L2 [Shewanella oneidensis MR-1] [NCBI NR]
  • lysophospholipase L2 [Shewanella oneidensis MR-1]gi|24351260|gb|AAN57692.1| lysophospholipase L2 [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • lysophospholipase L2 [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 329 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid metabolic process [ISSLink to PubMed article]
    Molecular Function: lysophospholipase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTPSVFST EHDLNTSEQQ AFWQTVVQDT LNTPDGLTLA YMMVKHPKAH ASIVISSGRV  60
   61 ESYLKYQELI FDLYQQGYSV FAIDHRGQGL SSRMTANPHQ GHVRRFNDYI DDFALFMQTV 120
  121 VLKHATSPLF LLGHSMGGAI GTLYLKQHPD VFTAAVFSAP MYGIKLPMPK GFVRWLASKL 180
  181 DTSLNGGEPN YVLSGQNYKA VPVPFKGNDL THCQSRYQAY RELYEAAPKL QLGSPTNRWL 240
  241 TESLDAADAC VLATTHIRTP ILILQAGEDK IVDNAAQNLA VSSNCQLKVI AGAAHEIFME 300
  301 KDSYRNQALN YALDFFKRYA TRDVDKQAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..329] PSI-BLAST 41.39794 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • lipase activity
    		•  0.602417432627875 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.535924720022784 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.307380251731525 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.054530214464529 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.00303228391703936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle