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Protein Overview: gi|24376185, gi|...

General Information:
Name(s) found: gi|24376185 [NCBI NR]
gi|24351232 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24376185|ref|NP_720229.1| menaquinone-specific isochorismate synthase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351232|gb|AAN57672.1|AE015903_4 menaquinone-specific isochorismate synthase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: menaquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: isochorismate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAHALSEDL KSLIDKLIQM KQVPATEPIV QLSLKTVSIP LISWLASQTL YPRIYWHGRD  60
   61 KVEEVAAIGA CKDFKFETGV DDKALASVYE QQRMLSSNPD IRYYGGVAFD RSIESWPEFG 120
  121 NTRFVLPRIE FRRSANQFSL RVNLNFADNN PIDEIDLAIA AIEAVMPARP LAPPNKLTLV 180
  181 SRQDIPDFPH WKTLVEQVIE PKFNQDTPKV VLSRLTELEV NEQVDPWMVL ACWQGRNPNS 240
  241 FQFGFQFSPD RTYISCSPER LFRRSQQELF TEALAGTTVR GLNQEEDVAL ANALLEDNKN 300
  301 SVENQLVRRH IVSMLTPLSQ YVGAEEEATI FKLNHIQHLH RAIRAELKPG VSDFQLLQAL 360
  361 HPTPAVGGLP RESAMTFIRQ REGYMRGWYA GACGYFNKDE SEFSVAIRSA LIEPGKINLF 420
  421 AGAGIIAGSD PEAEWQELEN KLATIMSILI EL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..452] PSI-BLAST 85.154902 No description for 2euaA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.48154800529305 bayes_pls_golite062009
  • isochorismate synthase activity
    		•  2.12058677071834 bayes_pls_golite062009
  • intramolecular transferase activity, transferring hydroxy groups
    		•  2.12058677071834 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  1.49234742790531 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.18272988873809 bayes_pls_golite062009
  • 4-amino-4-deoxychorismate synthase activity
    		•  1.13392130624907 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  0.47805305233277 bayes_pls_golite062009
  • lyase activity
    		•  0.151487106592176 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle