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Protein Overview: gi|24376159, gi|...

General Information:
Name(s) found: gi|24376159 [NCBI NR]
gi|24351202 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24376159|ref|NP_720203.1| UDP-glucose 6-dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351202|gb|AAN57646.1|AE015900_6 UDP-glucose 6-dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 387 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: polysaccharide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: UDP-glucose 6-dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIVVVGMGY VGLSNAVLLA QQNQVTAIDL MPERVKLVND RKSTVADNLI EEYLRNSALN  60
   61 LRATMDKNAV KDADFVIIAT PTDYDPQTNY FNTQSVENVA KEVLSLNPDT TIIIKSTVPV 120
  121 GFTASLRTRL NSDNILFSPE FLREGQALYD NLHPSRIIVG ERSARAQTFA TLLVNAAIKQ 180
  181 DIPILLTDST EAEAIKLFAN TFLAMRVAYF NELDTYAESR GLNTRQIIEG VCLDPRIGDY 240
  241 YNNPSFGYGG YCLPKDTKQL LANYNDVPNN LISAIVDSNT TRKDFIADAI ISKQPKRVGI 300
  301 YRLIMKSESD NFRASAVQGV MKRIKAKGIE VVVYEPVLKE SEFFKSTVIR NLEEFKAMCD 360
  361 VIVTNRMTSE LEDVADKVYT RDLFHHD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..387] PSI-BLAST 70.69897 UDP-glucose dehydrogenase (UDPGDH), middle domain; UDP-glucose dehydrogenase (UDPGDH); UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.16785883389468 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.17725706496184 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.17019598256699 bayes_pls_golite062009
  • phosphogluconate dehydrogenase (decarboxylating) activity
    		•  0.85002953624923 bayes_pls_golite062009
  • dTDP-4-dehydrorhamnose reductase activity
    		•  0.676398540588099 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  0.561621495862231 bayes_pls_golite062009
  • glycerol-3-phosphate dehydrogenase (NAD+) activity
    		•  0.323038721318701 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle