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Protein Overview: gi|24376070, gi|...

General Information:
Name(s) found: gi|24376070 [NCBI NR]
gi|24351089 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24376070|ref|NP_720113.1| heavy metal efflux system protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351089|gb|AAN57557.1|AE015891_8 heavy metal efflux system protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 472 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metal ion transport [ISSLink to PubMed article]
    Molecular Function: metal ion transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPWLAQAQ LVDPATQTEA GHQHHSNTTN QVKTYTCPMH PEVESHEPGR CPQCNMFLVE  60
   61 KADNPNTAAE HQAHTPSQNA TQVFETPTPK ANHLVKNQSS EATIKYVCPM HAHIISDAPG 120
  121 TCPICGMNLE KVETGGNTQE ININVSGSMQ QALALKVAKV ERDTLWKFVE TVGQIDYDES 180
  181 QISHIHARVT GWVEKLMVKS MGDTVKKGQL LYEIYSPDLV NAQDDYLLAL DTAKTSGNQR 240
  241 YQDLVRRAGL RLSFLGFNEQ QIKQLANSRQ TQYRVPFYAQ QEGVVETLSI RDGMYIEPST 300
  301 EVMSLVDLSK VWVIADVFEN EQSWISLGQK AEVSVPAMNI RGIEGKIDYI YPELDPITRS 360
  361 LRVRVVLNNK DISLRPKTLA KVALFGGPNK DVLVIPQEAL IQTGKENRVI VKQADDSFIA 420
  421 KAVTVGMMSQ GKAEIVSGLS EGERVVTSGQ FLLDSEASLK GSLMRLNSGH QH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] FFAS03 1.74 No description for 2innA was found.
    2 View Details [128..472] PSI-BLAST 49.221849 The structure of MexA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  4.64829294279324 bayes_pls_golite062009
  • protein transporter activity
    		•  3.50951009895823 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.3430410220484 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.81145434366148 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.80117130114792 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.70954389383019 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.56749631989168 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  2.31438469288221 bayes_pls_golite062009
    		• 2.24479805331017 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.06907229708248 bayes_pls_golite062009
    		• 1.4971766763537 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle