Protein Overview: gi|24350987, gi|...

General Information:
Name(s) found:	gi\|24375988 [NCBI NR] gi\|24350987 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24375988\|ref\|NP_720031.1\| formate dehydrogenase, C subunit, putative [Shewanella oneidensis MR-1] [NCBI NR] gi\|24350987\|gb\|AAN57475.1\|AE015883_6 formate dehydrogenase, C subunit, putative [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	342 amino acids
Gene Ontology:
Cellular Component:	formate dehydrogenase complex [ISS]
Biological Process:	anaerobic respiration [ISS]
Molecular Function:	electron carrier activity [ISS] formate dehydrogenase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKQLNKSL RSLFALMVLV MGLGLGSVMS ASPVQASDQQ SSQQQAKAQT SEADLWRAVK  60
   61 SGETGYTTAE GVEAGVLINV AGNQGKELRN QYITPIMALA VTGVFGVFLL FYLVNGPSKL 120
  121 SHGFSGKMVV RWSKADLWIH WIMAISCLVL MFTGLTIMLG KHVVQELLGP DIWAPLIYGS 180
  181 KTVHDWAGPI FIVSWIVCVV KWMPLQTFKM YDLKWFLVVG GYINFGPFKG KHPDSGFANA 240
  241 GEKMWFWTLT LFGLFISVSG IMLVLPGLDL PREASMAALL IHSISAVILI AFTIVHIWMA 300
  301 TVLSEGGMEC MKSGYCDENW AIQHHNLWYD EIKANGSLRY KD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..125]	deduced	N/A	No confident structure predictions are available.
2	View Details	[126..342]	PSI-BLAST	42.39794	Formate dehydrogenase N, cytochrome (gamma) subunit

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
formate dehydrogenase activity	12.0031413212101	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.74953039117709	bayes_pls_golite062009
oxidoreductase activity	6.50321219171766	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors	6.34988495153085	bayes_pls_golite062009
electron carrier activity	5.12151222577784	bayes_pls_golite062009
ubiquinol-cytochrome-c reductase activity	4.22830694615406	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	4.22830694615406	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	4.0059637271275	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	3.84393168925676	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	3.81757741812263	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	3.03994437587765	bayes_pls_golite062009
cation transmembrane transporter activity	2.71722961068288	bayes_pls_golite062009
ion transmembrane transporter activity	2.41992215050809	bayes_pls_golite062009
catalytic activity	1.19342057724506	bayes_pls_golite062009
binding	0.00724604692107611	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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