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Protein Overview: gi|24350913, gi|...

General Information:
Name(s) found: gi|24375931 [NCBI NR]
gi|24350913 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375931|ref|NP_719974.1| electron transfer flavoprotein-ubiquinone oxidoreductase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350913|gb|AAN57418.1|AE015877_9 electron transfer flavoprotein-ubiquinone oxidoreductase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: electron-transferring-flavoprotein dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERESMEFDV VIVGAGPAGL ATACRLMQIS QDSGKEITVC VVEKGSEVGA HILSGAVFEP  60
   61 RVLDELFSDW RDNGAPVTTA VTHDEIYLLS SETDSKLMPN AFVPKTMHNE GNYIVSVGNL 120
  121 CRWLATRAEA LGVEIFPGFA ASELLFNEDN SVKGILIGDM GVGADGQPKD SFMPGMELHA 180
  181 KYTVFSEGCR GHLGKQLIAK YHLDNGKTPQ HYGLGFKEIW KVPAEQHEQG KVVHTGGWPL 240
  241 TDGASGGGFL YHMEDNQIAV GLIIDLNYKN PHLSPFDEFQ RYKTHPVIAK YLAGGERLTY 300
  301 GARAITKGGL NSLPKMSFPG GLLIGCDAGT LNFAKIKGTH TAMKSGIVAA ETLAKAMMAE 360
  361 VEGGKDLDCY QTHLEESWLY EELYKSRNFG PAMHKFGTFL GGAFNYIDQN WFGGKFPITL 420
  421 RDEHPDYAQM APVSAYSKID YPKPDGKLSF DKLSSVYLSS TYHEEDQPCH LRLKDNSIPL 480
  481 GINLTQFNEP AQRYCPAGVY EIVEEAGKPK FVINAQNCIH CKTCDIKDPS QNITWVTPEG 540
  541 GGGPNYPNM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..549] PSI-BLAST 109.0 No description for 2gmhA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • NADH dehydrogenase activity
    		•  6.5929955386305 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  6.45562261241375 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  6.34963309803617 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  5.69483449389334 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  4.45434904225178 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.38767199872766 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  3.11137503143637 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.04960158864768 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.87261684242536 bayes_pls_golite062009
  • formate dehydrogenase activity
    		•  2.79579164562277 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor
    		•  2.25002926602325 bayes_pls_golite062009
  • electron-transferring-flavoprotein dehydrogenase activity
    		•  1.55451764082771 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.35744482443829 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.31328088143083 bayes_pls_golite062009
  • transporter activity
    		•  1.29839290134235 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  1.08975609376408 bayes_pls_golite062009
  • binding
    		•  1.08897727611544 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.07862908893913 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.69501605197281 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.643810447309487 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.556967966402473 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.31459693204333 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.301257942260531 bayes_pls_golite062009
  • protein binding
    		•  0.247306689726508 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.162130833238942 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.10059033442163 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.0724852054074128 bayes_pls_golite062009
  • DNA binding
    		•  0.022476246602636 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle