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Protein Overview: LEUC_SHEON

General Information:
Name(s) found: LEUC_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • 3-isopropylmalate dehydratase large subunit OS=Shewanella oneidensis (strain MR-1) GN=leuC PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: leucine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-isopropylmalate dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVPSKTIAP KTLYQKVWDA HIVATPEGEA PIIYVDRHLV HEVTSPQAFS GLKVAGRQLR  60
   61 APEKTFATMD HNTSTRSASL DALSPMARIQ VETLAQNCKD FGVLLYDIHH PNQGIVHVMG 120
  121 PELGITLPGT VIVCGDSHTA THGAFGALAF GIGTSEVEHV LATQTLRQLK AKTMKIEVRG 180
  181 QVTDGVTAKD IVLAIIGKIG MDGGTGYVVE FCGEAIEALS MEGRMTVCNM AIEMGAKAGM 240
  241 VAPDQTTFDY LEGREFAPKG EDWAQAVAEW KTLKTDVGAE FDATVVLDAA DIAPQLTWGT 300
  301 NPGQVVAIDA PVPNPADEVN PTIRSSMEKA LDYIGLTAGT PMTEVAINKV FIGSCTNSRI 360
  361 EDLRSAAKHA KGRKVAAGVT AIVVPGSGQV KAQAEAEGLD KIFIEAGFEW RLPGCSMCLA 420
  421 MNDDRLEAGD RCASTSNRNF EGRQGRGSRT HLVSPAMAAA AAIAGHFVDI RKPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..474] PSI-BLAST 143.0 Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  11.6597692115322 bayes_pls_golite062009
  • catalytic activity
    		•  2.4040324437254 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  2.08349115784849 bayes_pls_golite062009
  • hydro-lyase activity
    		•  2.04845291489052 bayes_pls_golite062009
  • lyase activity
    		•  2.0080619912194 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.952569345633996 bayes_pls_golite062009
  • aconitate hydratase activity
    		•  0.681826117995502 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0023376634609541 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle