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Protein Overview: gi|24375683, gi|...

General Information:
Name(s) found: gi|24375683 [NCBI NR]
gi|24350605 [NCBI NR]
Description(s) found:
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  • gi|24375683|ref|NP_719726.1| arginase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350605|gb|AAN57170.1|AE015851_11 arginase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • arginase family protein [Shewanella oneidensis MR-1]gi|24350605|gb|AAN57170.1| arginase family protein [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • arginase family protein [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid and derivative metabolic process [ISSLink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQWLNLQSN RFLSGTECLI LGQVHTADLQ LQVKTDEGAS LTALRAAVEQ LDERVINIVR  60
   61 AILDAGLEPI LIGGGHNNAY GLLMAASAHY QRQVAAVNLD PHSDFRLLEG RHSGNGFSYA 120
  121 ADRGALGYYH VLGLHELKNS EANLQQLTEF GGTWHSLQQI WIRREISLTQ ALQEIADKLN 180
  181 QTALPVALEL DVDAIAKMPS SASTAAGIPL LDAAHYISYI ASHCPCAYLH LAEAAPSCHE 240
  241 AGIEAGFRDV GQSISELIYA YVQARRQFLA Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 67.522879 Crystal structure of human arginase I from twinned crystal

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.05880797155222 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.32145925501689 bayes_pls_golite062009
  • hydrolase activity
    		•  1.13727088543411 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  1.06982226003161 bayes_pls_golite062009
  • agmatinase activity
    		•  0.152368507775601 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle