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View Structure Prediction Details

Protein: gi|24375683, gi|...
Organism: Shewanella oneidensis MR-1
Length: 271 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375683, gi|....

Description E-value Query
Range
Subject
Range
gi|10440052 - gi|10440052|dbj|BAB15633.1| unnamed protein product [Homo sapiens]
267.0 [0..8] [263..86]
gi|114554175, gi... - gi|114554175|ref|XP_001149966.1| PREDICTED: agmatine ureohydrolase (agmatinase) isoform 2 [Pan trogl...
267.0 [0..8] [263..86]
gi|68438525 - gi|68438525|ref|XP_688288.1| PREDICTED: similar to Agmatinase, mitochondrial precursor (Agmatine ure...
260.0 [0..8] [265..100]
gi|73950741 - gi|73950741|ref|XP_544555.2| PREDICTED: similar to Agmatinase, mitochondrial precursor (Agmatine ure...
260.0 [0..8] [263..86]
SPEB_CHICK - Agmatinase, mitochondrial OS=Gallus gallus GN=AGMAT PE=2 SV=1
256.0 [0..8] [261..74]

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Predicted Domain #1
Region A:
Residues: [1-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQWLNLQSN RFLSGTECLI LGQVHTADLQ LQVKTDEGAS LTALRAAVEQ LDERVINIVR  60
   61 AILDAGLEPI LIGGGHNNAY GLLMAASAHY QRQVAAVNLD PHSDFRLLEG RHSGNGFSYA 120
  121 ADRGALGYYH VLGLHELKNS EANLQQLTEF GGTWHSLQQI WIRREISLTQ ALQEIADKLN 180
  181 QTALPVALEL DVDAIAKMPS SASTAAGIPL LDAAHYISYI ASHCPCAYLH LAEAAPSCHE 240
  241 AGIEAGFRDV GQSISELIYA YVQARRQFLA Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.522879
Match: 1wvaA
Description: Crystal structure of human arginase I from twinned crystal
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.05880797155222 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.32145925501689 bayes_pls_golite062009
hydrolase activity 1.13727088543411 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.06982226003161 bayes_pls_golite062009
agmatinase activity 0.152368507775601 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle