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Protein Overview: gi|24375587, gi|...

General Information:
Name(s) found: gi|24375587 [NCBI NR]
gi|24350479 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375587|ref|NP_719630.1| MSHA biogenesis protein MshQ [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350479|gb|AAN57074.1|AE015841_2 MSHA biogenesis protein MshQ [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 1257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pilus assembly [ISSLink to PubMed article]
    pathogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRAFGIGTQ LFSVLAILLM TMMSSHAAID CGSVFPGPIQ SFSSNGQLEM QNQSMVVNYD  60
   61 NLDVCFKKAK PNGVNNSSCG IGQCKVSGIP SLAKAIPDIL DKTNSSINSN STVASWTTPS 120
  121 VELGVTLGYG AKFDTTRWDI GNVEVNGGSV TVSDAYDAYV FKSVTFYQNG TMTLRAGKTY 180
  181 IIDGDLNLSL GAINIIGTGN TQFYVRGTFT TSDTSVFNAS STTDIYVGRE LELQTDSKVQ 240
  241 GSFYVAGDAT LFTRSTLTGR LSAQNVRMFS NSKVIYDTSP ALECFTDDFS RTSLGNDWAI 300
  301 KVLGSSTPPS IVSNRLRITP ASGNQATAST FQRLFPAENN LVTVEFDYYA WSPSSGTGGD 360
  361 GVAVILSDAA VTPQPGSFGG ALGYAQRNDG TPGFAGGWLG VGLDEYGNFS NPNEGKVGRP 420
  421 ATLPYFRPQS VTLRGSAAAS YTYLAGTAAN LNPRVDVRST STAAPNHKYR IKVDSTIPSQ 480
  481 AWVSVERDVR NGQGYQVLVP AFNARAIPNQ GAVPEDFYLS FTGSTGGANN NHEIDNFKVC 540
  541 ALKSRPVGQQ VHHFEFDYSS SPLTCKAETM AIRACANANC SQLFTDPVTA QLSLNPNANG 600
  601 AWYVGGVNTP SVNFVNGLAT ASLRYNVSTP PVTIGVSSSI PSTIAGSNTL CRKGSGPLNT 660
  661 ASCTLSFAES GFIFDVPDKL ANKPTSINIS AVRKSNSSLE CVPAFGNATK NVGFWSTYVS 720
  721 PSSIPSALQQ AITIKGNVTG AITAIGKTQA LRTQIPLRFT NGVASLEINY PDAGRVQLDA 780
  781 RLDGTGEDTG LVMTGSDQFV SVPAGLCVKA ADASAYCPSA DMSCNAYRKA GQNFGMTLQA 840
  841 MAWEKDGDTD FCSGNLSTPN FIDAQMKLAS DVVAPSIANG GHDGVLGMTS YSHTAQTNNL 900
  901 NTISNQSISD VGVFQIAAQA TPNYLGTASS LNIPIGYSAN IGRFVPDRFL VGDISVLPAC 960
  961 GGFSYMAQPF PMSMSIKALN IGGAVTQNYF PPFSHASAKL VGENNNNGVD LQSRLSALPV1020
 1021 NAASWNQGVA TVDGSYRANV SRMTPNIAAN QYQDGPFELL DIGVQLMDND PRPNGLYSYV1080
 1081 ALADMDAAST GTCTNCNARK ITTQILRHGR VVMDNTYGPE TEILKMPTRA EYWNGTNWVL1140
 1141 NGDDSCTIAT YGLGSQVDNA GLGYNFDPDL AAGQSINRTG ASLAFQAGQF DLLWRAVTSS1200
 1201 GNLYRGQVTA PLDVPTWLEW YWNWNGVTPS SLSDPRASGF FGRYRGHDRI IYWREVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] deduced N/A No confident structure predictions are available.
    2 View Details [279..543] PSI-BLAST 5.39794 ERYTHRINA CORALLODENDRON LECTIN IN COMPLEX WITH N-ACTYLGALACTOSAMINE
    3 View Details [544..721] deduced N/A No confident structure predictions are available.
    4 View Details [722..878] deduced N/A No confident structure predictions are available.
    5 View Details [879..928] deduced N/A No confident structure predictions are available.
    6 View Details [929..1165] deduced N/A No confident structure predictions are available.
    7 View Details [1166..1257] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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