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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375587, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRAFGIGTQ LFSVLAILLM TMMSSHAAID CGSVFPGPIQ SFSSNGQLEM QNQSMVVNYD  60
   61 NLDVCFKKAK PNGVNNSSCG IGQCKVSGIP SLAKAIPDIL DKTNSSINSN STVASWTTPS 120
  121 VELGVTLGYG AKFDTTRWDI GNVEVNGGSV TVSDAYDAYV FKSVTFYQNG TMTLRAGKTY 180
  181 IIDGDLNLSL GAINIIGTGN TQFYVRGTFT TSDTSVFNAS STTDIYVGRE LELQTDSKVQ 240
  241 GSFYVAGDAT LFTRSTLTGR LSAQNVRMFS NSKVIYDTSP ALECFTDDFS RTSLGNDWAI 300
  301 KVLGSSTPPS IVSNRLRITP ASGNQATAST FQRLFPAENN LVTVEFDYYA WSPSSGTGGD 360
  361 GVAVILSDAA VTPQPGSFGG ALGYAQRNDG TPGFAGGWLG VGLDEYGNFS NPNEGKVGRP 420
  421 ATLPYFRPQS VTLRGSAAAS YTYLAGTAAN LNPRVDVRST STAAPNHKYR IKVDSTIPSQ 480
  481 AWVSVERDVR NGQGYQVLVP AFNARAIPNQ GAVPEDFYLS FTGSTGGANN NHEIDNFKVC 540
  541 ALKSRPVGQQ VHHFEFDYSS SPLTCKAETM AIRACANANC SQLFTDPVTA QLSLNPNANG 600
  601 AWYVGGVNTP SVNFVNGLAT ASLRYNVSTP PVTIGVSSSI PSTIAGSNTL CRKGSGPLNT 660
  661 ASCTLSFAES GFIFDVPDKL ANKPTSINIS AVRKSNSSLE CVPAFGNATK NVGFWSTYVS 720
  721 PSSIPSALQQ AITIKGNVTG AITAIGKTQA LRTQIPLRFT NGVASLEINY PDAGRVQLDA 780
  781 RLDGTGEDTG LVMTGSDQFV SVPAGLCVKA ADASAYCPSA DMSCNAYRKA GQNFGMTLQA 840
  841 MAWEKDGDTD FCSGNLSTPN FIDAQMKLAS DVVAPSIANG GHDGVLGMTS YSHTAQTNNL 900
  901 NTISNQSISD VGVFQIAAQA TPNYLGTASS LNIPIGYSAN IGRFVPDRFL VGDISVLPAC 960
  961 GGFSYMAQPF PMSMSIKALN IGGAVTQNYF PPFSHASAKL VGENNNNGVD LQSRLSALPV1020
 1021 NAASWNQGVA TVDGSYRANV SRMTPNIAAN QYQDGPFELL DIGVQLMDND PRPNGLYSYV1080
 1081 ALADMDAAST GTCTNCNARK ITTQILRHGR VVMDNTYGPE TEILKMPTRA EYWNGTNWVL1140
 1141 NGDDSCTIAT YGLGSQVDNA GLGYNFDPDL AAGQSINRTG ASLAFQAGQF DLLWRAVTSS1200
 1201 GNLYRGQVTA PLDVPTWLEW YWNWNGVTPS SLSDPRASGF FGRYRGHDRI IYWREVN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle