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Protein Overview: gi|24375387, gi|...

General Information:
Name(s) found: gi|24375387 [NCBI NR]
gi|24350217 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24375387|ref|NP_719430.1| DNA topoisomerase IV subunit B [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350217|gb|AAN56874.1|AE015822_6 DNA topoisomerase IV, B subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 628 amino acids

    Gene Ontology:
    Cellular Component: DNA topoisomerase IV complex [ISSLink to PubMed article]
    Biological Process: DNA topological change [ISSLink to PubMed article]
    Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNQYTSDAI EVLNGLDPVK RRPGMYTDTT RPNHLGQEVI DNSVDEALAG HATKIEVVLH  60
   61 TDNSLEVTDD GRGMPVDIHP EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN 120
  121 ALSRRVEVTV RRDGQVYDIA FENGFKVEEL KVTGTCGRRN TGTRVHFWPD TSYFDSPNFS 180
  181 NSKLIYLLRA KAVLCPGLRI KFTNKHTNEV HEWYYESGLT DYLKAAVGDN IMLPEEPFIG 240
  241 SFKGQIEAAD WAITWLPEGG ESINESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL 300
  301 IPRGIKLSPE DIWDRAAFIL SVKMQDPQFA GQTKEKLSSR QSSAFVSGIV RDAFSLWLNS 360
  361 NTELAESLAE MCINNAQKRL KAAKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD 420
  421 SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDSNDISEL 480
  481 RYGKICILAD ADSDGLHIAT LLCALFLKHY RVLVEQGHVY IAMPPLFRID IGKDVYYALD 540
  541 DAEKEGVLDR INAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDAEETD 600
  601 SLMDMLLAKK RSPDRKNWLE DKGDMAVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..391] PSI-BLAST 140.0 Crystal Structure of E. coli Topoisomerase IV ParE 43kDa subunit complexed with ADPNP
    2 View Details [392..628] PSI-BLAST 65.154902 TOPOISOMERASE RESIDUES 410-1202,


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle